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LOC8070110 light-inducible protein CPRF2 [ Sorghum bicolor (sorghum) ]

Gene ID: 8070110, updated on 22-Oct-2023

Summary

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Gene symbol
LOC8070110
Gene description
light-inducible protein CPRF2
Locus tag
SORBI_3008G157100
Gene type
protein coding
RefSeq status
MODEL
Organism
Sorghum bicolor
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Sorghinae; Sorghum
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Genomic context

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See LOC8070110 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
6
Annotation release Status Assembly Chr Location
101 current Sorghum_bicolor_NCBIv3 (GCF_000003195.3) 8 NC_012877.2 (58967349..58972568)

Chromosome 8 - NC_012877.2Genomic Context describing neighboring genes Neighboring gene auxin-responsive protein IAA31 Neighboring gene uncharacterized LOC110429693 Neighboring gene pyrophosphate-energized membrane proton pump 3 Neighboring gene skin secretory protein xP2-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_012877.2 Chromosome 8 Reference Sorghum_bicolor_NCBIv3 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
light-inducible protein CPRF2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sorghum bicolor Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sorghum_bicolor_NCBIv3 Primary Assembly

Genomic

  1. NC_012877.2 Reference Sorghum_bicolor_NCBIv3 Primary Assembly

    Range
    58967349..58972568
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021446608.1 → XP_021302283.1  light-inducible protein CPRF2 isoform X1

    Conserved Domains (2) summary
    cd14702
    Location:158 → 208
    bZIP_plant_GBF1; Basic leucine zipper (bZIP) domain of Plant G-box binding factor 1 (GBF1)-like transcription factors: a DNA-binding and dimerization domain
    pfam12498
    Location:224 → 331
    bZIP_C; Basic leucine-zipper C terminal

  2. XM_002442433.2 → XP_002442478.1  light-inducible protein CPRF2 isoform X2

    See identical proteins and their annotated locations for XP_002442478.1

    UniProtKB/TrEMBL
    A0A921QH09, C5YRE4
    Conserved Domains (2) summary
    cd14702
    Location:127 → 177
    bZIP_plant_GBF1; Basic leucine zipper (bZIP) domain of Plant G-box binding factor 1 (GBF1)-like transcription factors: a DNA-binding and dimerization domain
    pfam12498
    Location:193 → 300
    bZIP_C; Basic leucine-zipper C terminal
Nucleotide Protein
Heading Accession and Version

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