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LOC8069770 single myb histone 4 [ Sorghum bicolor (sorghum) ]

Gene ID: 8069770, updated on 22-Oct-2023

Summary

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Gene symbol
LOC8069770
Gene description
single myb histone 4
Locus tag
SORBI_3003G273300
Gene type
protein coding
RefSeq status
MODEL
Organism
Sorghum bicolor
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Sorghinae; Sorghum
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Genomic context

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Location:
chromosome: 3
Exon count:
6
Annotation release Status Assembly Chr Location
101 current Sorghum_bicolor_NCBIv3 (GCF_000003195.3) 3 NC_012872.2 (60965353..60975684)

Chromosome 3 - NC_012872.2Genomic Context describing neighboring genes Neighboring gene transcription factor bHLH84 Neighboring gene uncharacterized LOC110433742 Neighboring gene glycylpeptide N-tetradecanoyltransferase 1 Neighboring gene probable magnesium transporter NIPA9

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_012872.2 Chromosome 3 Reference Sorghum_bicolor_NCBIv3 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables double-stranded telomeric DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in nucleosome assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of nucleosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
single myb histone 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sorghum bicolor Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sorghum_bicolor_NCBIv3 Primary Assembly

Genomic

  1. NC_012872.2 Reference Sorghum_bicolor_NCBIv3 Primary Assembly

    Range
    60965353..60975684
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002456186.2 → XP_002456231.1  single myb histone 4

    See identical proteins and their annotated locations for XP_002456231.1

    UniProtKB/TrEMBL
    A0A921RH47, C5XHN5
    Conserved Domains (3) summary
    smart00526
    Location:115 → 173
    H15; Domain in histone families 1 and 5
    smart00717
    Location:5 → 56
    SANT; SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains
    cd11660
    Location:6 → 56
    SANT_TRF; Telomere repeat binding factor-like DNA-binding domains of the SANT/myb-like family
Nucleotide Protein
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