U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC8065585 zinc finger CCCH domain-containing protein 46 [ Sorghum bicolor (sorghum) ]

Gene ID: 8065585, updated on 22-Oct-2023

Summary

Go to the top of the page Help
Gene symbol
LOC8065585
Gene description
zinc finger CCCH domain-containing protein 46
Locus tag
SORBI_3010G254900
Gene type
protein coding
RefSeq status
MODEL
Organism
Sorghum bicolor
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Sorghinae; Sorghum
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC8065585 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
11
Annotation release Status Assembly Chr Location
101 current Sorghum_bicolor_NCBIv3 (GCF_000003195.3) 10 NC_012879.2 (59343891..59348377)

Chromosome 10 - NC_012879.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC8064950 Neighboring gene uncharacterized LOC8064951 Neighboring gene leucine-rich repeat extensin-like protein 4 Neighboring gene delta-aminolevulinic acid dehydratase, chloroplastic

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_012879.2 Chromosome 10 Reference Sorghum_bicolor_NCBIv3 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
zinc finger CCCH domain-containing protein 46

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Sorghum bicolor Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sorghum_bicolor_NCBIv3 Primary Assembly

Genomic

  1. NC_012879.2 Reference Sorghum_bicolor_NCBIv3 Primary Assembly

    Range
    59343891..59348377
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002437508.2 → XP_002437553.1  zinc finger CCCH domain-containing protein 46 isoform X1

    See identical proteins and their annotated locations for XP_002437553.1

    UniProtKB/TrEMBL
    A0A921U2X0, C5Z997
    Conserved Domains (2) summary
    smart00356
    Location:2 → 26
    ZnF_C3H1; zinc finger
    cl40531
    Location:210 → 297
    DotA_TraY; conjugal transfer/type IV secretion protein DotA/TraY

  2. XM_021450122.1 → XP_021305797.1  zinc finger CCCH domain-containing protein 46 isoform X2

    Conserved Domains (1) summary
    smart00356
    Location:2 → 26
    ZnF_C3H1; zinc finger
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials