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LOC8065582 squamosa promoter-binding-like protein 12 [ Sorghum bicolor (sorghum) ]

Gene ID: 8065582, updated on 22-Oct-2023

Summary

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Gene symbol
LOC8065582
Gene description
squamosa promoter-binding-like protein 12
Locus tag
SORBI_3010G254200
Gene type
protein coding
RefSeq status
MODEL
Organism
Sorghum bicolor
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Sorghinae; Sorghum
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Genomic context

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See LOC8065582 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
8
Annotation release Status Assembly Chr Location
101 current Sorghum_bicolor_NCBIv3 (GCF_000003195.3) 10 NC_012879.2 (59294726..59299697, complement)

Chromosome 10 - NC_012879.2Genomic Context describing neighboring genes Neighboring gene achilleol B synthase Neighboring gene probable serine/threonine-protein kinase PBL17 Neighboring gene uncharacterized LOC8065583 Neighboring gene protein PHOSPHATE STARVATION RESPONSE 3 Neighboring gene uncharacterized LOC8064948

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_012879.2 Chromosome 10 Reference Sorghum_bicolor_NCBIv3 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
squamosa promoter-binding-like protein 12

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sorghum bicolor Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sorghum_bicolor_NCBIv3 Primary Assembly

Genomic

  1. NC_012879.2 Reference Sorghum_bicolor_NCBIv3 Primary Assembly

    Range
    59294726..59299697 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021449730.1 → XP_021305405.1  squamosa promoter-binding-like protein 12 isoform X1

    UniProtKB/TrEMBL
    A0A1W0VUS8, A0A921Q5N0
    Conserved Domains (1) summary
    pfam03110
    Location:160 → 234
    SBP; SBP domain

  2. XM_021449725.1 → XP_021305400.1  squamosa promoter-binding-like protein 12 isoform X1

    UniProtKB/TrEMBL
    A0A1W0VUS8, A0A921Q5N0
    Conserved Domains (1) summary
    pfam03110
    Location:160 → 234
    SBP; SBP domain

  3. XM_021449732.1 → XP_021305407.1  squamosa promoter-binding-like protein 12 isoform X1

    UniProtKB/TrEMBL
    A0A1W0VUS8, A0A921Q5N0
    Conserved Domains (1) summary
    pfam03110
    Location:160 → 234
    SBP; SBP domain

  4. XM_021449728.1 → XP_021305403.1  squamosa promoter-binding-like protein 12 isoform X1

    UniProtKB/TrEMBL
    A0A1W0VUS8, A0A921Q5N0
    Conserved Domains (1) summary
    pfam03110
    Location:160 → 234
    SBP; SBP domain

  5. XM_021449726.1 → XP_021305401.1  squamosa promoter-binding-like protein 12 isoform X1

    UniProtKB/TrEMBL
    A0A1W0VUS8, A0A921Q5N0
    Conserved Domains (1) summary
    pfam03110
    Location:160 → 234
    SBP; SBP domain

  6. XM_021449727.1 → XP_021305402.1  squamosa promoter-binding-like protein 12 isoform X1

    UniProtKB/TrEMBL
    A0A1W0VUS8, A0A921Q5N0
    Conserved Domains (1) summary
    pfam03110
    Location:160 → 234
    SBP; SBP domain

  7. XM_021449733.1 → XP_021305408.1  squamosa promoter-binding-like protein 12 isoform X2

    UniProtKB/TrEMBL
    A0A194YLE6, A0A921Q664
    Conserved Domains (1) summary
    pfam03110
    Location:160 → 234
    SBP; SBP domain

  8. XM_021449729.1 → XP_021305404.1  squamosa promoter-binding-like protein 12 isoform X1

    UniProtKB/TrEMBL
    A0A1W0VUS8, A0A921Q5N0
    Conserved Domains (1) summary
    pfam03110
    Location:160 → 234
    SBP; SBP domain

  9. XM_002438926.2 → XP_002438971.1  squamosa promoter-binding-like protein 12 isoform X1

    See identical proteins and their annotated locations for XP_002438971.1

    UniProtKB/TrEMBL
    A0A1W0VUS8, A0A921Q5N0
    Conserved Domains (1) summary
    pfam03110
    Location:160 → 234
    SBP; SBP domain

  10. XM_021449731.1 → XP_021305406.1  squamosa promoter-binding-like protein 12 isoform X1

    UniProtKB/TrEMBL
    A0A1W0VUS8, A0A921Q5N0
    Conserved Domains (1) summary
    pfam03110
    Location:160 → 234
    SBP; SBP domain
Nucleotide Protein
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