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LOC8065137 homeobox-leucine zipper protein HOX18 [ Sorghum bicolor (sorghum) ]

Gene ID: 8065137, updated on 22-Oct-2023

Summary

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Gene symbol
LOC8065137
Gene description
homeobox-leucine zipper protein HOX18
Locus tag
SORBI_3010G247500
Gene type
protein coding
RefSeq status
MODEL
Organism
Sorghum bicolor
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Sorghinae; Sorghum
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Genomic context

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See LOC8065137 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
3
Annotation release Status Assembly Chr Location
101 current Sorghum_bicolor_NCBIv3 (GCF_000003195.3) 10 NC_012879.2 (58751605..58753216, complement)

Chromosome 10 - NC_012879.2Genomic Context describing neighboring genes Neighboring gene AAA-ATPase At3g28510 Neighboring gene U3 small nucleolar ribonucleoprotein protein IMP4 Neighboring gene probable protein phosphatase 2C 59 Neighboring gene cleavage stimulating factor 64

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_012879.2 Chromosome 10 Reference Sorghum_bicolor_NCBIv3 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
homeobox-leucine zipper protein HOX18

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sorghum bicolor Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sorghum_bicolor_NCBIv3 Primary Assembly

Genomic

  1. NC_012879.2 Reference Sorghum_bicolor_NCBIv3 Primary Assembly

    Range
    58751605..58753216 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002438895.2 → XP_002438940.1  homeobox-leucine zipper protein HOX18

    See identical proteins and their annotated locations for XP_002438940.1

    UniProtKB/TrEMBL
    A0A921U2S1, C5Z8U0
    Conserved Domains (2) summary
    smart00389
    Location:98 → 152
    HOX; Homeodomain
    cl23880
    Location:154 → 185
    HALZ; Homeobox associated leucine zipper
Nucleotide Protein
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