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LOC8055721 transcription factor BHLH148 [ Sorghum bicolor (sorghum) ]

Gene ID: 8055721, updated on 22-Oct-2023

Summary

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Gene symbol
LOC8055721
Gene description
transcription factor BHLH148
Locus tag
SORBI_3009G073800
Gene type
protein coding
RefSeq status
MODEL
Organism
Sorghum bicolor
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Sorghinae; Sorghum
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Genomic context

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See LOC8055721 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
5
Annotation release Status Assembly Chr Location
101 current Sorghum_bicolor_NCBIv3 (GCF_000003195.3) 9 NC_012878.2 (9185606..9187844)

Chromosome 9 - NC_012878.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC8065916 Neighboring gene putative RING-H2 finger protein ATL69 Neighboring gene thioredoxin-like 2, chloroplastic Neighboring gene uncharacterized LOC110430600

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_012878.2 Chromosome 9 Reference Sorghum_bicolor_NCBIv3 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein dimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transcription factor BHLH148

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sorghum bicolor Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sorghum_bicolor_NCBIv3 Primary Assembly

Genomic

  1. NC_012878.2 Reference Sorghum_bicolor_NCBIv3 Primary Assembly

    Range
    9185606..9187844
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021447214.1 → XP_021302889.1  transcription factor BHLH148 isoform X2

    Conserved Domains (1) summary
    cd00083
    Location:203 → 255
    HLH; Helix-loop-helix domain, found in specific DNA- binding proteins that act as transcription factors; 60-100 amino acids long. A DNA-binding basic region is followed by two alpha-helices separated by a variable loop region; HLH forms homo- and heterodimers, ...

  2. XM_021447213.1 → XP_021302888.1  transcription factor BHLH148 isoform X1

    UniProtKB/TrEMBL
    A0A921QAC2, C5YUF5
    Conserved Domains (1) summary
    cd11393
    Location:226 → 278
    bHLH_AtbHLH_like; basic helix-loop-helix (bHLH) domain found in Arabidopsis thaliana genes coding transcription factors and similar proteins

RNA

  1. XR_002447417.1 RNA Sequence

  2. XR_002447415.1 RNA Sequence

  3. XR_002447416.1 RNA Sequence

Nucleotide Protein
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