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TGME49_259690 orotidine-5-phosphate decarboxylase/orotate phosphoribosyltransferase [ Toxoplasma gondii ME49 ]

Gene ID: 7899615, updated on 26-Oct-2024

Summary

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Gene symbol
TGME49_259690
Gene description
orotidine-5-phosphate decarboxylase/orotate phosphoribosyltransferase
Locus tag
TGME49_259690
See related
ToxoDB:TGME49_259690; VEuPathDB:TGME49_259690
Gene type
protein coding
RNA name
orotidine-5-phosphate decarboxylase/orotate phosphoribosyltransferase
RefSeq status
PROVISIONAL
Organism
Toxoplasma gondii ME49 (strain: ME49)
Lineage
Eukaryota; Alveolata; Apicomplexa; Conoidasida; Coccidia; Eucoccidiorida; Eimeriorina; Sarcocystidae; Toxoplasma
Old locus tag
TGME49_059690
Orthologs
all
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Genomic context

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Location:
chromosome: VIIb
Exon count:
6
Sequence:
Chromosome: VIIb; NC_031475.1 (2709205..2712120, complement)

Chromosome VIIb - NC_031475.1Genomic Context describing neighboring genes Neighboring gene protein kinase Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene von Willebrand factor type A domain-containing protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_031475.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables orotidine-5'-phosphate decarboxylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in 'de novo' pyrimidine nucleobase biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in pyrimidine nucleotide biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
orotidine-5-phosphate decarboxylase/orotate phosphoribosyltransferase
XP_002365163.1
  • encoded by transcript TGME49_259690

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_031475.1 Reference assembly

    Range
    2709205..2712120 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002365122.1 → XP_002365163.1  orotidine-5-phosphate decarboxylase/orotate phosphoribosyltransferase [Toxoplasma gondii ME49]

    See identical proteins and their annotated locations for XP_002365163.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A086JPH7, A0A086K735, A0A086K8I4, A0A086M8M3, A0A086QE09, A0A086QRE8, A0A0F7UZA4, A0A0N5EAK2, A0A125YRV4, A0A139XS56, A0A151HLV0, A0A2G8YD63, A0A2T6IGJ2, A0A425HYC4, A0A7J6K2L5, B6KBH9, B9QB98, S7UY68, S8F196
    Conserved Domains (1) summary
    cl21457
    Location:24 → 310
    ICL_KPHMT; Members of the ICL/PEPM_KPHMT enzyme superfamily catalyze the formation and cleavage of either P-C or C-C bonds. Typical members are phosphoenolpyruvate mutase (PEPM), phosphonopyruvate hydrolase (PPH), carboxyPEP mutase (CPEP mutase), oxaloacetate ...
Nucleotide Protein
Heading Accession and Version

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