cacna1d calcium channel, voltage-dependent, L type, alpha 1D subunit [Xenopus tropicalis (tropical clawed frog)] - Gene

Summary

Official Symbol: cacna1dprovided by Xenbase
Official Full Name: calcium channel, voltage-dependent, L type, alpha 1D subunitprovided by Xenbase
Primary source: Xenbase:XB-GENE-876948
See related: AllianceGenome:Xenbase:XB-GENE-876948
Gene type: protein coding
RefSeq status: MODEL
Organism: Xenopus tropicalis
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
Also known as: cav1.3; ca(v)1.3
Summary: Predicted to enable GTPase activator activity. Predicted to act upstream of or within regulation of small GTPase mediated signal transduction. Human ortholog(s) of this gene implicated in type 2 diabetes mellitus. Orthologous to human CACNA1D (calcium voltage-gated channel subunit alpha1 D). [provided by Alliance of Genome Resources, Nov 2024]
Annotation information: Annotation category: partial on reference assembly
Orthologs: human mouse all
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Annotation release	Status	Assembly	Chr	Location
104	current	UCB_Xtro_10.0 (GCF_000004195.4)	4	NC_030680.2 (150528457..150539780, complement)
103	previous assembly	Xenopus_tropicalis_v9.1 (GCF_000004195.3)	Unplaced Scaffold	NW_016683703.1 (2827..13698, complement)
103	previous assembly	Xenopus_tropicalis_v9.1 (GCF_000004195.3)	Unplaced Scaffold	NW_016683789.1 (6317..6594, complement)

Chromosome 4 - NC_030680.2 Genomic Context describing neighboring genes

Genomic Sequence:

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Function	Evidence Code	Pubs
enables GTPase activator activity	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
acts_upstream_of_or_within regulation of small GTPase mediated signal transduction	IEA Inferred from Electronic Annotation more info

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The following sections contain reference sequences that belong to a specific genome build. Explain

The following Reference Sequences have been suppressed. Explain

NM_001079461.1: Suppressed sequence

Description

NM_001079461.1: This RefSeq was suppressed temporarily based on the calculation that the encoded protein was shorter than proteins from the putative ortholog from human: CACNA1D (GeneID:776).