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dsp desmoplakin [ Xenopus tropicalis (tropical clawed frog) ]

Gene ID: 779453, updated on 4-Nov-2024

Summary

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Official Symbol
dspprovided by Xenbase
Official Full Name
desmoplakinprovided by Xenbase
Primary source
Xenbase:XB-GENE-492195
See related
Ensembl:ENSXETG00000020444 AllianceGenome:Xenbase:XB-GENE-492195
Gene type
protein coding
RefSeq status
MODEL
Organism
Xenopus tropicalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
Also known as
dpi; dpii
Summary
Human ortholog(s) of this gene implicated in Carvajal syndrome; arrhythmogenic right ventricular cardiomyopathy; arrhythmogenic right ventricular dysplasia 8; dilated cardiomyopathy; and keratosis palmoplantaris striata 2. Orthologous to human DSP (desmoplakin). [provided by Alliance of Genome Resources, Nov 2024]
Orthologs
human mouse all
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Genomic context

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See dsp in Genome Data Viewer
Location:
chromosome: 6
Exon count:
24
Annotation release Status Assembly Chr Location
104 current UCB_Xtro_10.0 (GCF_000004195.4) 6 NC_030682.2 (89172331..89212295)
103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 6 NC_030682.1 (83198798..83239193)

Chromosome 6 - NC_030682.2Genomic Context describing neighboring genes Neighboring gene RNA binding motif protein 22 Neighboring gene RIO kinase 1 Neighboring gene collagen alpha-1(XXII) chain Neighboring gene small nuclear ribonucleoprotein, U11/U12 48KDa subunit

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Names
desmoplakin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCB_Xtro_10.0 Primary Assembly

Genomic

  1. NC_030682.2 Reference UCB_Xtro_10.0 Primary Assembly

    Range
    89172331..89212295
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_001171073.3 RNA Sequence

    Related
    ENSXETT00000060121.3

  2. XR_004223205.1 RNA Sequence

  3. XR_004223206.1 RNA Sequence

Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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