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HCN2 hyperpolarization activated cyclic nucleotide gated potassium and sodium channel 2 [ Gallus gallus (chicken) ]

Gene ID: 770384, updated on 17-Aug-2024

Summary

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Official Symbol
HCN2provided by CGNC
Official Full Name
hyperpolarization activated cyclic nucleotide gated potassium and sodium channel 2provided by CGNC
Primary source
CGNC:55989
See related
Ensembl:ENSGALG00010027479
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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See HCN2 in Genome Data Viewer
Location:
chromosome: 28
Exon count:
9
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 28 NC_052559.1 (3121381..3134052)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 28 NC_052600.1 (2687450..2700095)

Chromosome 28 - NC_052559.1Genomic Context describing neighboring genes Neighboring gene cell division cycle 34, ubiqiutin conjugating enzyme Neighboring gene basigin Neighboring gene RNA polymerase mitochondrial Neighboring gene fibroblast growth factor 22

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables voltage-gated potassium channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in potassium ion transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2
Names
hyperpolarization activated cyclic nucleotide-gated potassium channel 2
potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052559.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    3121381..3134052
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003642867.5 → XP_003642915.3  potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2 isoform X1

    UniProtKB/TrEMBL
    A0A8V1AGR5
    Related
    ENSGALP00010040777.1, ENSGALT00010066582.1
    Conserved Domains (3) summary
    PLN03192
    Location:152 → 697
    PLN03192; Voltage-dependent potassium channel; Provisional
    PHA03307
    Location:848 → 957
    PHA03307; transcriptional regulator ICP4; Provisional
    cd00038
    Location:552 → 660
    CAP_ED; effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor protein (CRP)), which binds cAMP, FNR (fumarate and nitrate reduction), which uses an iron-sulfur cluster to sense oxygen) and CooA, a heme containing CO ...

  2. XM_040653707.2 → XP_040509641.1  potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2 isoform X2

    UniProtKB/TrEMBL
    A0A8V1AGR5
    Conserved Domains (3) summary
    PLN03192
    Location:7 → 502
    PLN03192; Voltage-dependent potassium channel; Provisional
    PHA03307
    Location:653 → 762
    PHA03307; transcriptional regulator ICP4; Provisional
    cd00038
    Location:357 → 465
    CAP_ED; effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor protein (CRP)), which binds cAMP, FNR (fumarate and nitrate reduction), which uses an iron-sulfur cluster to sense oxygen) and CooA, a heme containing CO ...

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052600.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    2687450..2700095
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040692727.1 → XP_040548661.1  potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2 isoform X1

    UniProtKB/TrEMBL
    A0A8V1AGR5
    Conserved Domains (3) summary
    PLN03192
    Location:152 → 697
    PLN03192; Voltage-dependent potassium channel; Provisional
    PHA03307
    Location:848 → 957
    PHA03307; transcriptional regulator ICP4; Provisional
    cd00038
    Location:552 → 660
    CAP_ED; effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor protein (CRP)), which binds cAMP, FNR (fumarate and nitrate reduction), which uses an iron-sulfur cluster to sense oxygen) and CooA, a heme containing CO ...

  2. XM_040692728.2 → XP_040548662.1  potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2 isoform X2

    UniProtKB/TrEMBL
    A0A8V1AGR5
    Conserved Domains (3) summary
    PLN03192
    Location:7 → 502
    PLN03192; Voltage-dependent potassium channel; Provisional
    PHA03307
    Location:653 → 762
    PHA03307; transcriptional regulator ICP4; Provisional
    cd00038
    Location:357 → 465
    CAP_ED; effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor protein (CRP)), which binds cAMP, FNR (fumarate and nitrate reduction), which uses an iron-sulfur cluster to sense oxygen) and CooA, a heme containing CO ...
Nucleotide Protein
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