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RBM38 RNA binding motif protein 38 [ Gallus gallus (chicken) ]

Gene ID: 768866, updated on 12-Oct-2024

Summary

Symbol
RBM38provided by CGNC
Full Name
RNA binding motif protein 38provided by CGNC
Primary source
CGNC:5765
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
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Genomic context

See RBM38 in Genome Data Viewer
Location:
chromosome: 20
Exon count:
4
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 20 NC_052551.1 (11957716..11971359, complement)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 20 NC_052592.1 (11745053..11758714, complement)

Chromosome 20 - NC_052551.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC121111957 Neighboring gene uncharacterized LOC419322 Neighboring gene phosphoenolpyruvate carboxykinase 1 Neighboring gene uncharacterized LOC107054840 Neighboring gene uncharacterized LOC112530128 Neighboring gene ribonucleic acid export 1 Neighboring gene SPO11, initiator of meiotic double stranded breaks

Genomic regions, transcripts, and products

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001305093.1NP_001292022.1  RNA-binding protein 38

    See identical proteins and their annotated locations for NP_001292022.1

    Status: VALIDATED

    Source sequence(s)
    AJ399148, AJ720310, BU144792
    UniProtKB/Swiss-Prot
    Q5ZJX4
    Conserved Domains (2) summary
    TIGR01628
    Location:23207
    PABP-1234; polyadenylate binding protein, human types 1, 2, 3, 4 family
    cd12384
    Location:1186
    RRM_RBM24_RBM38_like; RNA recognition motif (RRM) found in eukaryotic RNA-binding protein RBM24, RBM38 and similar proteins

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052551.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    11957716..11971359 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052592.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    11745053..11758714 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)