fblim1 filamin binding LIM protein 1 [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: fblim1provided by ZNC
Official Full Name: filamin binding LIM protein 1provided by ZNC
Primary source: ZFIN:ZDB-GENE-061013-662
See related: Ensembl:ENSDARG00000071558 AllianceGenome:ZFIN:ZDB-GENE-061013-662
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: fa28a10; wu:fa28a10; zgc:154176
Summary: Predicted to enable filamin binding activity. Predicted to be involved in cell-cell adhesion. Predicted to be active in focal adhesion and stress fiber. Orthologous to human FBLIM1 (filamin binding LIM protein 1). [provided by Alliance of Genome Resources, Apr 2022]
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 22

Exon count:: 8

Annotation release	Status	Assembly	Chr	Location
RS_2024_08	current	GRCz11 (GCF_000002035.6)	22	NC_007133.7 (158112..164955, complement)
105	previous assembly	GRCz10 (GCF_000002035.5)	22	NC_007133.6 (185079..191890, complement)

Chromosome 22 - NC_007133.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Markers

fa28a10.s1 (e-PCR)
- UniSTS:202497

AA606161 (e-PCR)
- UniSTS:186909

G47471 (e-PCR)
- UniSTS:108247

z19799 (e-PCR), detects polymorphism
- UniSTS:238838

Gene Ontology Provided by ZFIN

Function	Evidence Code	Pubs
enables filamin binding	IBA Inferred from Biological aspect of Ancestor more info
enables metal ion binding	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
involved_in cell-cell adhesion	IBA Inferred from Biological aspect of Ancestor more info

Component	Evidence Code	Pubs
is_active_in focal adhesion	IBA Inferred from Biological aspect of Ancestor more info
is_active_in stress fiber	IBA Inferred from Biological aspect of Ancestor more info

General protein information

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Preferred Names: filamin-binding LIM protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.