U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC7497753 myb family transcription factor PHL6 [ Populus trichocarpa (black cottonwood) ]

Gene ID: 7497753, updated on 23-Nov-2023

Summary

Go to the top of the page Help
Gene symbol
LOC7497753
Gene description
myb family transcription factor PHL6
Locus tag
POPTR_007G003200v4
Gene type
protein coding
RefSeq status
MODEL
Organism
Populus trichocarpa
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC7497753 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
9
Annotation release Status Assembly Chr Location
102 current P.trichocarpa_v4.1 (GCF_000002775.5) 7 NC_037291.2 (217540..223356)
101 previous assembly Pop_tri_v3 (GCF_000002775.4) 7 NC_037291.1 (226936..232574)

Chromosome 7 - NC_037291.2Genomic Context describing neighboring genes Neighboring gene organic cation/carnitine transporter 7-like Neighboring gene organic cation/carnitine transporter 7 Neighboring gene uncharacterized LOC112328187 Neighboring gene histone acetyltransferase HAC1

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
myb family transcription factor PHL6

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Populus trichocarpa Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference P.trichocarpa_v4.1 Primary Assembly

Genomic

  1. NC_037291.2 Reference P.trichocarpa_v4.1 Primary Assembly

    Range
    217540..223356
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024605647.2 → XP_024461415.1  myb family transcription factor PHL6

    UniProtKB/TrEMBL
    A0A2K1ZLT0
    Conserved Domains (3) summary
    TIGR01557
    Location:264 → 320
    myb_SHAQKYF; myb-like DNA-binding domain, SHAQKYF class
    PLN03162
    Location:176 → 373
    PLN03162; golden-2 like transcription factor; Provisional
    pfam14379
    Location:354 → 398
    Myb_CC_LHEQLE; MYB-CC type transfactor, LHEQLE motif

  2. XM_052454557.1 → XP_052310517.1  myb family transcription factor PHL6

    UniProtKB/TrEMBL
    A0A2K1ZLT0

  3. XM_002310867.4 → XP_002310903.3  myb family transcription factor PHL6

    UniProtKB/TrEMBL
    A0A2K1ZLT0
    Conserved Domains (3) summary
    TIGR01557
    Location:264 → 320
    myb_SHAQKYF; myb-like DNA-binding domain, SHAQKYF class
    PLN03162
    Location:176 → 373
    PLN03162; golden-2 like transcription factor; Provisional
    pfam14379
    Location:354 → 398
    Myb_CC_LHEQLE; MYB-CC type transfactor, LHEQLE motif
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials