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LOC7495122 auxin response factor 17 [ Populus trichocarpa (black cottonwood) ]

Gene ID: 7495122, updated on 6-Jun-2024

Summary

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Gene symbol
LOC7495122
Gene description
auxin response factor 17
Locus tag
POPTR_002G089900v4
Gene type
protein coding
RefSeq status
MODEL
Organism
Populus trichocarpa
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
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Genomic context

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See LOC7495122 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
3
Annotation release Status Assembly Chr Location
102 current P.trichocarpa_v4.1 (GCF_000002775.5) 2 NC_037286.2 (6508707..6513522)
101 previous assembly Pop_tri_v3 (GCF_000002775.4) 2 NC_037286.1 (6400987..6405835)

Chromosome 2 - NC_037286.2Genomic Context describing neighboring genes Neighboring gene vacuolar protein sorting-associated protein 9A-like Neighboring gene beta-1,3-galactosyltransferase 7 Neighboring gene uncharacterized LOC7495123 Neighboring gene uncharacterized LOC7495124

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in response to hormone IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
auxin response factor 17

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Populus trichocarpa Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference P.trichocarpa_v4.1 Primary Assembly

Genomic

  1. NC_037286.2 Reference P.trichocarpa_v4.1 Primary Assembly

    Range
    6508707..6513522
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002300984.4 → XP_002301020.4  auxin response factor 17

    UniProtKB/TrEMBL
    A0A2K2BFU5
Nucleotide Protein
Heading Accession and Version

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