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LOC7489296 uncharacterized LOC7489296 [ Populus trichocarpa (black cottonwood) ]

Gene ID: 7489296, updated on 23-Nov-2023

Summary

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Gene symbol
LOC7489296
Gene description
uncharacterized LOC7489296
Locus tag
POPTR_009G023100v4
Gene type
protein coding
RefSeq status
MODEL
Organism
Populus trichocarpa
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
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Genomic context

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See LOC7489296 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
3
Annotation release Status Assembly Chr Location
102 current P.trichocarpa_v4.1 (GCF_000002775.5) 9 NC_037293.2 (3515840..3519322, complement)
101 previous assembly Pop_tri_v3 (GCF_000002775.4) 9 NC_037293.1 (3472087..3475575, complement)

Chromosome 9 - NC_037293.2Genomic Context describing neighboring genes Neighboring gene protein SRG1 Neighboring gene protein EMSY-LIKE 3 Neighboring gene protein N-terminal asparagine amidohydrolase Neighboring gene uncharacterized LOC7489295

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Analysis of 4,664 high-quality sequence-finished poplar full-length cDNA clones and their utility for the discovery of genes responding to insect feeding. Ralph SG, et al. BMC Genomics, 2008 Jan 29. PMID 18230180, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uncharacterized protein LOC7489296

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Populus trichocarpa Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference P.trichocarpa_v4.1 Primary Assembly

Genomic

  1. NC_037293.2 Reference P.trichocarpa_v4.1 Primary Assembly

    Range
    3515840..3519322 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_052455795.1 → XP_052311755.1  uncharacterized protein LOC7489296 isoform X2

  2. XM_024608902.2 → XP_024464670.2  uncharacterized protein LOC7489296 isoform X1

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases
Research Materials