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LOC7486594 uncharacterized LOC7486594 [ Populus trichocarpa (black cottonwood) ]

Gene ID: 7486594, updated on 23-Nov-2023

Summary

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Gene symbol
LOC7486594
Gene description
uncharacterized LOC7486594
Locus tag
POPTR_005G164100v4
Gene type
protein coding
RefSeq status
MODEL
Organism
Populus trichocarpa
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
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Genomic context

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See LOC7486594 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
4
Annotation release Status Assembly Chr Location
102 current P.trichocarpa_v4.1 (GCF_000002775.5) 5 NC_037289.2 (16287450..16293959)
101 previous assembly Pop_tri_v3 (GCF_000002775.4) 5 NC_037289.1 (16961278..16967835)

Chromosome 5 - NC_037289.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC7468892 Neighboring gene uncharacterized LOC112327575 Neighboring gene 5'-adenylylsulfate reductase-like 4 Neighboring gene uncharacterized LOC7468894

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uncharacterized protein LOC7486594

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Populus trichocarpa Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference P.trichocarpa_v4.1 Primary Assembly

Genomic

  1. NC_037289.2 Reference P.trichocarpa_v4.1 Primary Assembly

    Range
    16287450..16293959
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024601141.2 → XP_024456909.2  uncharacterized protein LOC7486594 isoform X1

  2. XM_024601142.2 → XP_024456910.2  uncharacterized protein LOC7486594 isoform X2

  3. XM_052452962.1 → XP_052308922.1  uncharacterized protein LOC7486594 isoform X4

  4. XM_052452961.1 → XP_052308921.1  uncharacterized protein LOC7486594 isoform X3

  5. XM_052452964.1 → XP_052308924.1  uncharacterized protein LOC7486594 isoform X6

  6. XM_052452963.1 → XP_052308923.1  uncharacterized protein LOC7486594 isoform X5

Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases
Research Materials