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LOC7481212 squamosa promoter-binding-like protein 16 [ Populus trichocarpa (black cottonwood) ]

Gene ID: 7481212, updated on 23-Nov-2023

Summary

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Gene symbol
LOC7481212
Gene description
squamosa promoter-binding-like protein 16
Locus tag
POPTR_003G169400v4
Gene type
protein coding
RefSeq status
MODEL
Organism
Populus trichocarpa
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
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Genomic context

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See LOC7481212 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
5
Annotation release Status Assembly Chr Location
102 current P.trichocarpa_v4.1 (GCF_000002775.5) 3 NC_037287.2 (17805943..17809724)
101 previous assembly Pop_tri_v3 (GCF_000002775.4) 3 NC_037287.1 (17944884..17947772)

Chromosome 3 - NC_037287.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC7481210 Neighboring gene probable DNA primase large subunit Neighboring gene agamous-like MADS-box protein MADS4 Neighboring gene MADS-box transcription factor 14 Neighboring gene MADS-box protein FLOWERING LOCUS C

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
squamosa promoter-binding-like protein 16

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Populus trichocarpa Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference P.trichocarpa_v4.1 Primary Assembly

Genomic

  1. NC_037287.2 Reference P.trichocarpa_v4.1 Primary Assembly

    Range
    17805943..17809724
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_052451709.1 → XP_052307669.1  squamosa promoter-binding-like protein 16

    UniProtKB/TrEMBL
    B9GZN1

  2. XM_052451710.1 → XP_052307670.1  squamosa promoter-binding-like protein 16

    UniProtKB/TrEMBL
    B9GZN1
Nucleotide Protein
Heading Accession and Version

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