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LOC7478130 uncharacterized LOC7478130 [ Populus trichocarpa (black cottonwood) ]

Gene ID: 7478130, updated on 23-Nov-2023

Summary

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Gene symbol
LOC7478130
Gene description
uncharacterized LOC7478130
Locus tag
POPTR_003G018400v4
Gene type
protein coding
RefSeq status
MODEL
Organism
Populus trichocarpa
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
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Genomic context

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See LOC7478130 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
1
Annotation release Status Assembly Chr Location
102 current P.trichocarpa_v4.1 (GCF_000002775.5) 3 NC_037287.2 (1897486..1898294)
101 previous assembly Pop_tri_v3 (GCF_000002775.4) 3 NC_037287.1 (2234536..2235384)

Chromosome 3 - NC_037287.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC18110600 Neighboring gene pentatricopeptide repeat-containing protein At2g22410, mitochondrial-like Neighboring gene uncharacterized LOC7480761 Neighboring gene uncharacterized LOC112326846 Neighboring gene uncharacterized LOC7480762 Neighboring gene uncharacterized LOC7480763

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uncharacterized protein LOC7478130
Names
B3 family protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Populus trichocarpa Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference P.trichocarpa_v4.1 Primary Assembly

Genomic

  1. NC_037287.2 Reference P.trichocarpa_v4.1 Primary Assembly

    Range
    1897486..1898294
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002303139.4 → XP_002303175.2  uncharacterized protein LOC7478130

    See identical proteins and their annotated locations for XP_002303175.2

    UniProtKB/TrEMBL
    B9GZR3
    Conserved Domains (1) summary
    cd10017
    Location:3 → 102
    B3_DNA; Plant-specific B3-DNA binding domain
Nucleotide Protein
Heading Accession and Version

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