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LOC7475763 ethylene-responsive transcription factor ERF021 [ Populus trichocarpa (black cottonwood) ]

Gene ID: 7475763, updated on 23-Nov-2023

Summary

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Gene symbol
LOC7475763
Gene description
ethylene-responsive transcription factor ERF021
Locus tag
POPTR_019G075500v4
Gene type
protein coding
RefSeq status
MODEL
Organism
Populus trichocarpa
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
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Genomic context

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See LOC7475763 in Genome Data Viewer
Location:
chromosome: 19
Exon count:
1
Annotation release Status Assembly Chr Location
102 current P.trichocarpa_v4.1 (GCF_000002775.5) 19 NC_037303.2 (11671135..11672200)
101 previous assembly Pop_tri_v3 (GCF_000002775.4) 19 NC_037303.1 (10985681..10986761)

Chromosome 19 - NC_037303.2Genomic Context describing neighboring genes Neighboring gene alcohol-forming fatty acyl-CoA reductase Neighboring gene pentatricopeptide repeat-containing protein At1g71460, chloroplastic Neighboring gene ethylene-responsive transcription factor ERF022 Neighboring gene protein WVD2-like 7

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ethylene-responsive transcription factor ERF021

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Populus trichocarpa Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference P.trichocarpa_v4.1 Primary Assembly

Genomic

  1. NC_037303.2 Reference P.trichocarpa_v4.1 Primary Assembly

    Range
    11671135..11672200
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002325483.3 → XP_002325519.1  ethylene-responsive transcription factor ERF021

    See identical proteins and their annotated locations for XP_002325519.1

    UniProtKB/TrEMBL
    B9IQB6
    Conserved Domains (1) summary
    smart00380
    Location:12 → 74
    AP2; DNA-binding domain in plant proteins such as APETALA2 and EREBPs
Nucleotide Protein
Heading Accession and Version

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