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LOC7463350 protein FAR1-RELATED SEQUENCE 5 [ Populus trichocarpa (black cottonwood) ]

Gene ID: 7463350, updated on 23-Nov-2023

Summary

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Gene symbol
LOC7463350
Gene description
protein FAR1-RELATED SEQUENCE 5
Locus tag
POPTR_009G170100v4
Gene type
protein coding
RefSeq status
MODEL
Organism
Populus trichocarpa
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
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Genomic context

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See LOC7463350 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
2
Annotation release Status Assembly Chr Location
102 current P.trichocarpa_v4.1 (GCF_000002775.5) 9 NC_037293.2 (12922878..12927251)
101 previous assembly Pop_tri_v3 (GCF_000002775.4) 9 NC_037293.1 (12891405..12895732)

Chromosome 9 - NC_037293.2Genomic Context describing neighboring genes Neighboring gene 3-hydroxy-3-methylglutaryl-coenzyme A reductase 1 Neighboring gene cellulose synthase-like protein D4 Neighboring gene transcription termination factor MTERF6, chloroplastic/mitochondrial Neighboring gene uncharacterized LOC7481677

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein FAR1-RELATED SEQUENCE 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Populus trichocarpa Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference P.trichocarpa_v4.1 Primary Assembly

Genomic

  1. NC_037293.2 Reference P.trichocarpa_v4.1 Primary Assembly

    Range
    12922878..12927251
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024608962.2 → XP_024464730.1  protein FAR1-RELATED SEQUENCE 5

    UniProtKB/TrEMBL
    A0A2K1Z961, B9HPM0
    Conserved Domains (1) summary
    cl28060
    Location:58 → 701
    FAR1; FAR1 DNA-binding domain
Nucleotide Protein
Heading Accession and Version

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