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THAPSDRAFT_270227 hypothetical protein [ Thalassiosira pseudonana CCMP1335 ]

Gene ID: 7452980, updated on 21-Dec-2023

Summary

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Gene symbol
THAPSDRAFT_270227
Gene description
hypothetical protein
Locus tag
THAPSDRAFT_270227
Gene type
protein coding
RNA name
predicted protein
RefSeq status
PROVISIONAL
Organism
Thalassiosira pseudonana CCMP1335 (strain: CCMP1335)
Lineage
Eukaryota; Stramenopiles; Bacillariophyta; Coscinodiscophyceae; Thalassiosirophycidae; Thalassiosirales; Thalassiosiraceae; Thalassiosira
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Genomic context

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See THAPSDRAFT_270227 in Genome Data Viewer
Location:
chromosome: 13
Exon count:
3
Sequence:
Chromosome: 13; NC_012076.1 (168431..170672, complement)

Chromosome 13 - NC_012076.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_012076.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The genome of the diatom Thalassiosira pseudonana: ecology, evolution, and metabolism. Armbrust EV, et al. Science, 2004 Oct 1. PMID 15459382
  2. The Phaeodactylum genome reveals the evolutionary history of diatom genomes. Bowler C, et al. Nature, 2008 Nov 13. PMID 18923393

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell division IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in microtubule-based process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in organelle fission IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell division site IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in microtubule IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
hypothetical protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_012076.1 Reference assembly

    Range
    168431..170672 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002293469.1 → XP_002293505.1  predicted protein [Thalassiosira pseudonana CCMP1335]

    See identical proteins and their annotated locations for XP_002293505.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    B8CB19
    Conserved Domains (2) summary
    PRK09330
    Location:141 → 516
    PRK09330; cell division protein FtsZ; Validated
    cd02201
    Location:141 → 433
    FtsZ_type1; Filamenting temperature sensitive mutant Z, type 1
Nucleotide Protein
Heading Accession and Version

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