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MAPKKK mitogen activated protein kinase-like protein [ Thalassiosira pseudonana CCMP1335 ]

Gene ID: 7452376, updated on 21-Dec-2023

Summary

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Gene symbol
MAPKKK
Gene description
mitogen activated protein kinase-like protein
Locus tag
THAPSDRAFT_35929
Gene type
protein coding
RNA name
mitogen activated protein kinase-like protein
RefSeq status
PROVISIONAL
Organism
Thalassiosira pseudonana CCMP1335 (strain: CCMP1335)
Lineage
Eukaryota; Stramenopiles; Bacillariophyta; Coscinodiscophyceae; Thalassiosirophycidae; Thalassiosirales; Thalassiosiraceae; Thalassiosira
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Genomic context

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See MAPKKK in Genome Data Viewer
Location:
chromosome: 8
Exon count:
2
Sequence:
Chromosome: 8; NC_012071.1 (1168825..1169757, complement)

Chromosome 8 - NC_012071.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_012071.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The genome of the diatom Thalassiosira pseudonana: ecology, evolution, and metabolism. Armbrust EV, et al. Science, 2004 Oct 1. PMID 15459382
  2. The Phaeodactylum genome reveals the evolutionary history of diatom genomes. Bowler C, et al. Nature, 2008 Nov 13. PMID 18923393

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein serine/threonine kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in intracellular signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
mitogen activated protein kinase-like protein
XP_002292143.1
  • Strong alignment with other MAPKKK (54% amino acid identity). Contains conserved protein kinase, serine/threonine kinase, and tyrosine kinase domains (IPR000719, IPR002290, IPR001245). Also has signature MAPKKK sequence GTPEFMAPELY.

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_012071.1 Reference assembly

    Range
    1168825..1169757 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002292107.1 → XP_002292143.1  mitogen activated protein kinase-like protein, partial [Thalassiosira pseudonana CCMP1335]

    See identical proteins and their annotated locations for XP_002292143.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    B8C7K0
    Conserved Domains (2) summary
    smart00220
    Location:17 → 275
    S_TKc; Serine/Threonine protein kinases, catalytic domain
    cd13983
    Location:14 → 275
    STKc_WNK; Catalytic domain of the Serine/Threonine kinase, With No Lysine (WNK) kinase
Nucleotide Protein
Heading Accession and Version

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