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THAPSDRAFT_261211 hypothetical protein [ Thalassiosira pseudonana CCMP1335 ]

Gene ID: 7452181, updated on 18-Jun-2017

Summary

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Gene symbol
THAPSDRAFT_261211
Gene description
hypothetical protein
Locus tag
THAPSDRAFT_261211
Gene type
protein coding
RNA name
hypothetical protein
RefSeq status
PROVISIONAL
Organism
Thalassiosira pseudonana CCMP1335 (strain: CCMP1335)
Lineage
Eukaryota; Stramenopiles; Bacillariophyta; Coscinodiscophyceae; Thalassiosirophycidae; Thalassiosirales; Thalassiosiraceae; Thalassiosira
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Genomic context

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See THAPSDRAFT_261211 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
2
Sequence:
Chromosome: 2; NC_012065.1 (232502..233350)

Chromosome 2 - NC_012065.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_012065.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The genome of the diatom Thalassiosira pseudonana: ecology, evolution, and metabolism. Armbrust EV, et al. Science, 2004 Oct 1. PMID 15459382
  2. The Phaeodactylum genome reveals the evolutionary history of diatom genomes. Bowler C, et al. Nature, 2008 Nov 13. PMID 18923393

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Names
hypothetical protein
XP_002287151.1
  • based on sequence similarity to hypothetical proteins and presence of domain found in other hypothetical proteins; putative protein of unknown function

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_012065.1 Reference assembly

    Range
    232502..233350
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002287115.1 → XP_002287151.1  hypothetical protein THAPSDRAFT_261211, partial [Thalassiosira pseudonana CCMP1335]

    See identical proteins and their annotated locations for XP_002287151.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    B8BTF8
    Conserved Domains (2) summary
    COG1262
    Location:4 → 248
    YfmG; Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domain [Posttranslational modification, protein turnover, chaperones]
    cl23855
    Location:4 → 245
    FGE-sulfatase; Sulfatase-modifying factor enzyme 1
Nucleotide Protein
Heading Accession and Version

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