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GDH_1 glutmatae dehydrogenase, nadp-gdh [ Thalassiosira pseudonana CCMP1335 ]

Gene ID: 7451828, updated on 21-Dec-2023

Summary

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Gene symbol
GDH_1
Gene description
glutmatae dehydrogenase, nadp-gdh
Locus tag
THAPSDRAFT_38359
Gene type
protein coding
RNA name
glutmatae dehydrogenase, nadp-gdh
RefSeq status
PROVISIONAL
Organism
Thalassiosira pseudonana CCMP1335 (strain: CCMP1335)
Lineage
Eukaryota; Stramenopiles; Bacillariophyta; Coscinodiscophyceae; Thalassiosirophycidae; Thalassiosirales; Thalassiosiraceae; Thalassiosira
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Genomic context

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See GDH_1 in Genome Data Viewer
Location:
chromosome: 19, map: unlocalized
Exon count:
4

NW_002243510.1Genomic Context describing neighboring genes Neighboring gene serine carboxypeptidase Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_002243510.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The genome of the diatom Thalassiosira pseudonana: ecology, evolution, and metabolism. Armbrust EV, et al. Science, 2004 Oct 1. PMID 15459382
  2. The Phaeodactylum genome reveals the evolutionary history of diatom genomes. Bowler C, et al. Nature, 2008 Nov 13. PMID 18923393

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glutamate dehydrogenase (NADP+) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glutamate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
glutmatae dehydrogenase, nadp-gdh
XP_002297200.1
  • NADP specific

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_002243510.1 Reference assembly

    Range
    71003..72597 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002297164.1 → XP_002297200.1  glutmatae dehydrogenase, nadp-gdh, partial [Thalassiosira pseudonana CCMP1335]

    See identical proteins and their annotated locations for XP_002297200.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    B8LDR0
    Conserved Domains (3) summary
    PRK09414
    Location:1 → 436
    PRK09414; glutamate dehydrogenase; Provisional
    pfam02812
    Location:42 → 170
    ELFV_dehydrog_N; Glu/Leu/Phe/Val dehydrogenase, dimerization domain
    cl21454
    Location:181 → 436
    NADB_Rossmann; Rossmann-fold NAD(P)(+)-binding proteins
Nucleotide Protein
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Gene LinkOut

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Molecular Biology Databases
Research Materials