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THAPSDRAFT_26224 hypothetical protein [ Thalassiosira pseudonana CCMP1335 ]

Gene ID: 7451415, updated on 21-Dec-2023

Summary

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Gene symbol
THAPSDRAFT_26224
Gene description
hypothetical protein
Locus tag
THAPSDRAFT_26224
Gene type
protein coding
RNA name
hypothetical protein
RefSeq status
PROVISIONAL
Organism
Thalassiosira pseudonana CCMP1335 (strain: CCMP1335)
Lineage
Eukaryota; Stramenopiles; Bacillariophyta; Coscinodiscophyceae; Thalassiosirophycidae; Thalassiosirales; Thalassiosiraceae; Thalassiosira
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Genomic context

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See THAPSDRAFT_26224 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
1
Sequence:
Chromosome: 4; NC_012067.1 (2318582..2319614)

Chromosome 4 - NC_012067.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_012067.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The genome of the diatom Thalassiosira pseudonana: ecology, evolution, and metabolism. Armbrust EV, et al. Science, 2004 Oct 1. PMID 15459382
  2. The Phaeodactylum genome reveals the evolutionary history of diatom genomes. Bowler C, et al. Nature, 2008 Nov 13. PMID 18923393

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in mitochondrion organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
hypothetical protein
XP_002289569.1
  • Probable prohibitin, an evolutionarily conserved protein that inhibits cell cycle progression; Q9P7H3 (Q9P7H3) Putative prohibitin (model%: 99, hit%: 98, score: 761, %id: 54) [Schizosaccharomyces pombe]; EST support; probable prohibitin, an evolutionarily conserved protein that inhibits cell cycle progression

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_012067.1 Reference assembly

    Range
    2318582..2319614
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002289533.1 → XP_002289569.1  hypothetical protein THAPSDRAFT_26224 [Thalassiosira pseudonana CCMP1335]

    See identical proteins and their annotated locations for XP_002289569.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    B8C0Q3
    Conserved Domains (2) summary
    smart00244
    Location:24 → 187
    PHB; prohibitin homologues
    cd03401
    Location:26 → 221
    SPFH_prohibitin; Prohibitin family; SPFH (stomatin, prohibitin, flotillin, and HflK/C) superfamily
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Research Materials