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RS27 RS27, ribosomal protein 27 40S small ribosomal subunit [ Thalassiosira pseudonana CCMP1335 ]

Gene ID: 7451256, updated on 21-Dec-2023

Summary

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Gene symbol
RS27
Gene description
RS27, ribosomal protein 27 40S small ribosomal subunit
Locus tag
THAPSDRAFT_30036
Gene type
protein coding
RNA name
RS27, ribosomal protein 27 40S small ribosomal subunit
RefSeq status
PROVISIONAL
Organism
Thalassiosira pseudonana CCMP1335 (strain: CCMP1335)
Lineage
Eukaryota; Stramenopiles; Bacillariophyta; Coscinodiscophyceae; Thalassiosirophycidae; Thalassiosirales; Thalassiosiraceae; Thalassiosira
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Genomic context

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See RS27 in Genome Data Viewer
Location:
chromosome: 14
Exon count:
1
Sequence:
Chromosome: 14; NC_012077.1 (619123..619468)

Chromosome 14 - NC_012077.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_012077.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The genome of the diatom Thalassiosira pseudonana: ecology, evolution, and metabolism. Armbrust EV, et al. Science, 2004 Oct 1. PMID 15459382
  2. The Phaeodactylum genome reveals the evolutionary history of diatom genomes. Bowler C, et al. Nature, 2008 Nov 13. PMID 18923393

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables structural constituent of ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in ribosomal small subunit assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in translation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of cytosolic small ribosomal subunit IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
RS27, ribosomal protein 27 40S small ribosomal subunit
XP_002293775.1
  • RS27, ribosomal protein 27, 40S small ribosomal subunit, nuclear, translation, protein biosynthesis

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_012077.1 Reference assembly

    Range
    619123..619468
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002293739.1 → XP_002293775.1  RS27, ribosomal protein 27 40S small ribosomal subunit [Thalassiosira pseudonana CCMP1335]

    See identical proteins and their annotated locations for XP_002293775.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    B8CCJ1
    Conserved Domains (1) summary
    PLN00209
    Location:1 → 82
    PLN00209; ribosomal protein S27; Provisional
Nucleotide Protein
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