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THAPSDRAFT_269717 HSP70 domain-containing protein [ Thalassiosira pseudonana CCMP1335 ]

Gene ID: 7450532, updated on 21-Dec-2023

Summary

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Gene symbol
THAPSDRAFT_269717
Gene description
HSP70 domain-containing protein
Locus tag
THAPSDRAFT_269717
Gene type
protein coding
RNA name
HSP70 domain-containing protein
RefSeq status
PROVISIONAL
Organism
Thalassiosira pseudonana CCMP1335 (strain: CCMP1335)
Lineage
Eukaryota; Stramenopiles; Bacillariophyta; Coscinodiscophyceae; Thalassiosirophycidae; Thalassiosirales; Thalassiosiraceae; Thalassiosira
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Genomic context

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See THAPSDRAFT_269717 in Genome Data Viewer
Location:
chromosome: 13
Exon count:
3
Sequence:
Chromosome: 13; NC_012076.1 (988259..990047)

Chromosome 13 - NC_012076.1Genomic Context describing neighboring genes Neighboring gene ATP sulfurylase Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_012076.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The genome of the diatom Thalassiosira pseudonana: ecology, evolution, and metabolism. Armbrust EV, et al. Science, 2004 Oct 1. PMID 15459382
  2. The Phaeodactylum genome reveals the evolutionary history of diatom genomes. Bowler C, et al. Nature, 2008 Nov 13. PMID 18923393

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP-dependent protein folding chaperone IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein folding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
HSP70 domain-containing protein
XP_002293466.1
  • Similarity to regions of hsp70 proteins from other organisms. Contains InterPro domain #IPR001023, which is found in heat shock protein (hsp70) family members.

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_012076.1 Reference assembly

    Range
    988259..990047
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002293430.1 → XP_002293466.1  HSP70 domain-containing protein [Thalassiosira pseudonana CCMP1335]

    See identical proteins and their annotated locations for XP_002293466.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    B8CBX0
    Conserved Domains (1) summary
    cl17037
    Location:14 → 120
    NBD_sugar-kinase_HSP70_actin; Nucleotide-Binding Domain of the sugar kinase/HSP70/actin superfamily
Nucleotide Protein
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Gene LinkOut

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Molecular Biology Databases
Research Materials