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GLNA hypothetical protein [ Thalassiosira pseudonana CCMP1335 ]

Gene ID: 7449439, updated on 21-Dec-2023

Summary

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Gene symbol
GLNA
Gene description
hypothetical protein
Locus tag
THAPSDRAFT_26051
Gene type
protein coding
RNA name
hypothetical protein
RefSeq status
PROVISIONAL
Organism
Thalassiosira pseudonana CCMP1335 (strain: CCMP1335)
Lineage
Eukaryota; Stramenopiles; Bacillariophyta; Coscinodiscophyceae; Thalassiosirophycidae; Thalassiosirales; Thalassiosiraceae; Thalassiosira
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Genomic context

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See GLNA in Genome Data Viewer
Location:
chromosome: 22
Exon count:
3
Sequence:
Chromosome: 22; NC_012085.1 (945288..947029)

Chromosome 22 - NC_012085.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_012085.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The genome of the diatom Thalassiosira pseudonana: ecology, evolution, and metabolism. Armbrust EV, et al. Science, 2004 Oct 1. PMID 15459382
  2. The Phaeodactylum genome reveals the evolutionary history of diatom genomes. Bowler C, et al. Nature, 2008 Nov 13. PMID 18923393

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glutamine synthetase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glutamine biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
hypothetical protein
XP_002294945.1
  • typical eukaryotic GS isoform (GSII), ammonium assimilation; GLNA

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_012085.1 Reference assembly

    Range
    945288..947029
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002294909.1 → XP_002294945.1  hypothetical protein THAPSDRAFT_26051 [Thalassiosira pseudonana CCMP1335]

    See identical proteins and their annotated locations for XP_002294945.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    B8CFZ9
    Conserved Domains (3) summary
    PLN02284
    Location:55 → 402
    PLN02284; glutamine synthetase
    pfam00120
    Location:155 → 400
    Gln-synt_C; Glutamine synthetase, catalytic domain
    pfam03951
    Location:98 → 145
    Gln-synt_N; Glutamine synthetase, beta-Grasp domain
Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases
Research Materials