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THAPSDRAFT_264863 hypothetical protein [ Thalassiosira pseudonana CCMP1335 ]

Gene ID: 7449421, updated on 21-Dec-2023

Summary

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Gene symbol
THAPSDRAFT_264863
Gene description
hypothetical protein
Locus tag
THAPSDRAFT_264863
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Thalassiosira pseudonana CCMP1335 (strain: CCMP1335)
Lineage
Eukaryota; Stramenopiles; Bacillariophyta; Coscinodiscophyceae; Thalassiosirophycidae; Thalassiosirales; Thalassiosiraceae; Thalassiosira
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Genomic context

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See THAPSDRAFT_264863 in Genome Data Viewer
Location:
chromosome: 22
Exon count:
3
Sequence:
Chromosome: 22; NC_012085.1 (876157..877066)

Chromosome 22 - NC_012085.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_012085.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The genome of the diatom Thalassiosira pseudonana: ecology, evolution, and metabolism. Armbrust EV, et al. Science, 2004 Oct 1. PMID 15459382
  2. The Phaeodactylum genome reveals the evolutionary history of diatom genomes. Bowler C, et al. Nature, 2008 Nov 13. PMID 18923393

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in endoplasmic reticulum to Golgi vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in trans-Golgi network IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
hypothetical protein
XP_002294927.1
  • Contains homology to hypothetical proteins from a variety of organisms

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_012085.1 Reference assembly

    Range
    876157..877066
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002294891.1 → XP_002294927.1   THAPSDRAFT_264863, partial [Thalassiosira pseudonana CCMP1335]

    See identical proteins and their annotated locations for XP_002294927.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    B8CFX4
    Conserved Domains (1) summary
    cl21557
    Location:20 → 189
    Yip1; Yip1 domain
Nucleotide Protein
Heading Accession and Version

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Research Materials