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THAPS_6885 hypothetical protein [ Thalassiosira pseudonana CCMP1335 ]

Gene ID: 7449204, updated on 21-Dec-2023

Summary

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Gene symbol
THAPS_6885
Gene description
hypothetical protein
Locus tag
THAPS_6885
Gene type
protein coding
RNA name
predicted protein
RefSeq status
PROVISIONAL
Organism
Thalassiosira pseudonana CCMP1335 (strain: CCMP1335)
Lineage
Eukaryota; Stramenopiles; Bacillariophyta; Coscinodiscophyceae; Thalassiosirophycidae; Thalassiosirales; Thalassiosiraceae; Thalassiosira
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Genomic context

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See THAPS_6885 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
1
Sequence:
Chromosome: 7; NC_012070.1 (731600..732508)

Chromosome 7 - NC_012070.1Genomic Context describing neighboring genes Neighboring gene EF containing protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene HSF36, heat shock transcription factor DNA-binding domain-containing protein, DNA binding, transcription factor

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_012070.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The genome of the diatom Thalassiosira pseudonana: ecology, evolution, and metabolism. Armbrust EV, et al. Science, 2004 Oct 1. PMID 15459382
  2. The Phaeodactylum genome reveals the evolutionary history of diatom genomes. Bowler C, et al. Nature, 2008 Nov 13. PMID 18923393

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
hypothetical protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_012070.1 Reference assembly

    Range
    731600..732508
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002295755.1 → XP_002295791.1  predicted protein [Thalassiosira pseudonana CCMP1335]

    See identical proteins and their annotated locations for XP_002295791.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    B5YMR8
    Conserved Domains (2) summary
    smart00220
    Location:9 → 293
    S_TKc; Serine/Threonine protein kinases, catalytic domain
    cl21453
    Location:13 → 292
    PKc_like; Protein Kinases, catalytic domain
Nucleotide Protein
Heading Accession and Version

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