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THAPS_263127 ser/thr kinase [ Thalassiosira pseudonana CCMP1335 ]

Gene ID: 7449011, updated on 21-Dec-2023

Summary

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Gene symbol
THAPS_263127
Gene description
ser/thr kinase
Locus tag
THAPS_263127
Gene type
protein coding
RNA name
ser/thr kinase
RefSeq status
PROVISIONAL
Organism
Thalassiosira pseudonana CCMP1335 (strain: CCMP1335)
Lineage
Eukaryota; Stramenopiles; Bacillariophyta; Coscinodiscophyceae; Thalassiosirophycidae; Thalassiosirales; Thalassiosiraceae; Thalassiosira
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Genomic context

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See THAPS_263127 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
5
Sequence:
Chromosome: 7; NC_012070.1 (667268..668479)

Chromosome 7 - NC_012070.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_012070.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The genome of the diatom Thalassiosira pseudonana: ecology, evolution, and metabolism. Armbrust EV, et al. Science, 2004 Oct 1. PMID 15459382
  2. The Phaeodactylum genome reveals the evolutionary history of diatom genomes. Bowler C, et al. Nature, 2008 Nov 13. PMID 18923393

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
ser/thr kinase

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_012070.1 Reference assembly

    Range
    667268..668479
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002295745.1 → XP_002295781.1  ser/thr kinase, partial [Thalassiosira pseudonana CCMP1335]

    See identical proteins and their annotated locations for XP_002295781.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    B5YMP4
    Conserved Domains (2) summary
    smart00220
    Location:1 → 214
    S_TKc; Serine/Threonine protein kinases, catalytic domain
    cl21453
    Location:1 → 213
    PKc_like; Protein Kinases, catalytic domain
Nucleotide Protein
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Gene LinkOut

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