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THAPSDRAFT_11557 hypothetical protein [ Thalassiosira pseudonana CCMP1335 ]

Gene ID: 7448548, updated on 18-Jun-2017

Summary

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Gene symbol
THAPSDRAFT_11557
Gene description
hypothetical protein
Locus tag
THAPSDRAFT_11557
Gene type
protein coding
RNA name
predicted protein
RefSeq status
PROVISIONAL
Organism
Thalassiosira pseudonana CCMP1335 (strain: CCMP1335)
Lineage
Eukaryota; Stramenopiles; Bacillariophyta; Coscinodiscophyceae; Thalassiosirophycidae; Thalassiosirales; Thalassiosiraceae; Thalassiosira
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Genomic context

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Location:
chromosome: 20
Exon count:
2
Sequence:
Chromosome: 20; NC_012083.1 (471509..472929, complement)

Chromosome 20 - NC_012083.1Genomic Context describing neighboring genes Neighboring gene fucoxanthin chlorophyll a/c protein 2 Neighboring gene fucoxanthin chl a/c protein-deviant sequence Neighboring gene valine--tRNA ligase-like protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_012083.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The genome of the diatom Thalassiosira pseudonana: ecology, evolution, and metabolism. Armbrust EV, et al. Science, 2004 Oct 1. PMID 15459382
  2. The Phaeodactylum genome reveals the evolutionary history of diatom genomes. Bowler C, et al. Nature, 2008 Nov 13. PMID 18923393

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Names
hypothetical protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_012083.1 Reference assembly

    Range
    471509..472929 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002294708.1 → XP_002294744.1  predicted protein [Thalassiosira pseudonana CCMP1335]

    See identical proteins and their annotated locations for XP_002294744.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    B8CEW0
    Conserved Domains (1) summary
    cl21496
    Location:149 → 330
    2OG-FeII_Oxy; 2OG-Fe(II) oxygenase superfamily
Nucleotide Protein
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