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THAPSDRAFT_264691 hypothetical protein [ Thalassiosira pseudonana CCMP1335 ]

Gene ID: 7448523, updated on 21-Dec-2023

Summary

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Gene symbol
THAPSDRAFT_264691
Gene description
hypothetical protein
Locus tag
THAPSDRAFT_264691
Gene type
protein coding
RNA name
hypothetical protein
RefSeq status
PROVISIONAL
Organism
Thalassiosira pseudonana CCMP1335 (strain: CCMP1335)
Lineage
Eukaryota; Stramenopiles; Bacillariophyta; Coscinodiscophyceae; Thalassiosirophycidae; Thalassiosirales; Thalassiosiraceae; Thalassiosira
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Genomic context

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See THAPSDRAFT_264691 in Genome Data Viewer
Location:
chromosome: 20
Exon count:
2
Sequence:
Chromosome: 20; NC_012083.1 (308486..309061, complement)

Chromosome 20 - NC_012083.1Genomic Context describing neighboring genes Neighboring gene lipoate protein ligase Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene cullin family-like protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_012083.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The genome of the diatom Thalassiosira pseudonana: ecology, evolution, and metabolism. Armbrust EV, et al. Science, 2004 Oct 1. PMID 15459382
  2. The Phaeodactylum genome reveals the evolutionary history of diatom genomes. Bowler C, et al. Nature, 2008 Nov 13. PMID 18923393

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cilium assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of MKS complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
hypothetical protein
XP_002294719.1
  • based on sequence similarity to hypothetical proteins from metazoans; hypothetical protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_012083.1 Reference assembly

    Range
    308486..309061 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002294683.1 → XP_002294719.1  hypothetical protein THAPSDRAFT_264691, partial [Thalassiosira pseudonana CCMP1335]

    See identical proteins and their annotated locations for XP_002294719.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    B8CER0
    Conserved Domains (1) summary
    pfam07162
    Location:11 → 168
    B9-C2; Ciliary basal body-associated, B9 protein
Nucleotide Protein
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