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THAPSDRAFT_264678 NAD or nadp-dependent reductase [ Thalassiosira pseudonana CCMP1335 ]

Gene ID: 7448503, updated on 21-Dec-2023

Summary

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Gene symbol
THAPSDRAFT_264678
Gene description
NAD or nadp-dependent reductase
Locus tag
THAPSDRAFT_264678
Gene type
protein coding
RNA name
NAD or nadp-dependent reductase
RefSeq status
PROVISIONAL
Organism
Thalassiosira pseudonana CCMP1335 (strain: CCMP1335)
Lineage
Eukaryota; Stramenopiles; Bacillariophyta; Coscinodiscophyceae; Thalassiosirophycidae; Thalassiosirales; Thalassiosiraceae; Thalassiosira
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Genomic context

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See THAPSDRAFT_264678 in Genome Data Viewer
Location:
chromosome: 20
Exon count:
5
Sequence:
Chromosome: 20; NC_012083.1 (188702..190789)

Chromosome 20 - NC_012083.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene phosphatidylinositol phosphatase Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_012083.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The genome of the diatom Thalassiosira pseudonana: ecology, evolution, and metabolism. Armbrust EV, et al. Science, 2004 Oct 1. PMID 15459382
  2. The Phaeodactylum genome reveals the evolutionary history of diatom genomes. Bowler C, et al. Nature, 2008 Nov 13. PMID 18923393

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables FMN binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables NADPH-hemoprotein reductase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables flavin adenine dinucleotide binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
NAD or nadp-dependent reductase
XP_002294566.1
  • This sequence has domains consistent with an FAD or NAD(P)-dependent oxidoreductase. Best hits suggest this may be a cytochrome P450 reductase.

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_012083.1 Reference assembly

    Range
    188702..190789
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002294530.1 → XP_002294566.1  NAD or nadp-dependent reductase, partial [Thalassiosira pseudonana CCMP1335]

    See identical proteins and their annotated locations for XP_002294566.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    B8CEM2
    Conserved Domains (3) summary
    COG0369
    Location:1 → 615
    CysJ; Sulfite reductase, alpha subunit (flavoprotein) [Inorganic ion transport and metabolism]
    pfam00258
    Location:6 → 135
    Flavodoxin_1; Flavodoxin
    cl06868
    Location:221 → 615
    FNR_like; Ferredoxin reductase (FNR), an FAD and NAD(P) binding protein, was intially identified as a chloroplast reductase activity, catalyzing the electron transfer from reduced iron-sulfur protein ferredoxin to NADP+ as the final step in the electron transport ...
Nucleotide Protein
Heading Accession and Version

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