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THAPSDRAFT_262599 hypothetical protein [ Thalassiosira pseudonana CCMP1335 ]

Gene ID: 7448184, updated on 18-Jun-2017

Summary

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Gene symbol
THAPSDRAFT_262599
Gene description
hypothetical protein
Locus tag
THAPSDRAFT_262599
Gene type
protein coding
RNA name
hypothetical protein
RefSeq status
PROVISIONAL
Organism
Thalassiosira pseudonana CCMP1335 (strain: CCMP1335)
Lineage
Eukaryota; Stramenopiles; Bacillariophyta; Coscinodiscophyceae; Thalassiosirophycidae; Thalassiosirales; Thalassiosiraceae; Thalassiosira
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Genomic context

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See THAPSDRAFT_262599 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
2
Sequence:
Chromosome: 5; NC_012068.1 (1668433..1669316)

Chromosome 5 - NC_012068.1Genomic Context describing neighboring genes Neighboring gene dna-directed RNA polymerase i Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_012068.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The genome of the diatom Thalassiosira pseudonana: ecology, evolution, and metabolism. Armbrust EV, et al. Science, 2004 Oct 1. PMID 15459382
  2. The Phaeodactylum genome reveals the evolutionary history of diatom genomes. Bowler C, et al. Nature, 2008 Nov 13. PMID 18923393

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Names
hypothetical protein
XP_002290362.1
  • one of 22 hits of a hypotetical DNA helicase fron the Gtheta nucleomorph genome, no EST support; fragment of hypothetical DNA helicase

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_012068.1 Reference assembly

    Range
    1668433..1669316
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002290326.1 → XP_002290362.1  hypothetical protein THAPSDRAFT_262599, partial [Thalassiosira pseudonana CCMP1335]

    See identical proteins and their annotated locations for XP_002290362.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    B8C3F7
    Conserved Domains (1) summary
    pfam03457
    Location:131 → 197
    HA; Helicase associated domain
Nucleotide Protein
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