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THAPSDRAFT_264051 ubiquinol cytochrome c reductase [ Thalassiosira pseudonana CCMP1335 ]

Gene ID: 7447860, updated on 18-Sep-2024

Summary

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Gene symbol
THAPSDRAFT_264051
Gene description
ubiquinol cytochrome c reductase
Locus tag
THAPSDRAFT_264051
Gene type
protein coding
RNA name
ubiquinol cytochrome c reductase
RefSeq status
PROVISIONAL
Organism
Thalassiosira pseudonana CCMP1335 (strain: CCMP1335)
Lineage
Eukaryota; Stramenopiles; Bacillariophyta; Coscinodiscophyceae; Thalassiosirophycidae; Thalassiosirales; Thalassiosiraceae; Thalassiosira
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Genomic context

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See THAPSDRAFT_264051 in Genome Data Viewer
Location:
chromosome: 13
Exon count:
1
Sequence:
Chromosome: 13; NC_012076.1 (778963..779199)

Chromosome 13 - NC_012076.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_012076.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The genome of the diatom Thalassiosira pseudonana: ecology, evolution, and metabolism. Armbrust EV, et al. Science, 2004 Oct 1. PMID 15459382
  2. The Phaeodactylum genome reveals the evolutionary history of diatom genomes. Bowler C, et al. Nature, 2008 Nov 13. PMID 18923393
  3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in mitochondrial electron transport, ubiquinol to cytochrome c IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
ubiquinol cytochrome c reductase
XP_002293428.1
  • putative ubiquinol cytochrome c reductase based on sequence similarity and presence of defining domain

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_012076.1 Reference assembly

    Range
    778963..779199
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002293392.2 → XP_002293428.1  ubiquinol cytochrome c reductase [Thalassiosira pseudonana CCMP1335]

    See identical proteins and their annotated locations for XP_002293428.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    B8CBP1
    Conserved Domains (1) summary
    pfam02320
    Location:19 → 77
    UCR_hinge; Ubiquinol-cytochrome C reductase hinge protein
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases
Research Materials