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THAPSDRAFT_269490 riboflavin kinase/FAD synthetase [ Thalassiosira pseudonana CCMP1335 ]

Gene ID: 7447039, updated on 21-Dec-2023

Summary

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Gene symbol
THAPSDRAFT_269490
Gene description
riboflavin kinase/FAD synthetase
Locus tag
THAPSDRAFT_269490
Gene type
protein coding
RNA name
riboflavin kinase/FAD synthetase
RefSeq status
PROVISIONAL
Organism
Thalassiosira pseudonana CCMP1335 (strain: CCMP1335)
Lineage
Eukaryota; Stramenopiles; Bacillariophyta; Coscinodiscophyceae; Thalassiosirophycidae; Thalassiosirales; Thalassiosiraceae; Thalassiosira
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Genomic context

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See THAPSDRAFT_269490 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
3
Sequence:
Chromosome: 10; NC_012073.1 (308937..309607, complement)

Chromosome 10 - NC_012073.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_012073.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The genome of the diatom Thalassiosira pseudonana: ecology, evolution, and metabolism. Armbrust EV, et al. Science, 2004 Oct 1. PMID 15459382
  2. The Phaeodactylum genome reveals the evolutionary history of diatom genomes. Bowler C, et al. Nature, 2008 Nov 13. PMID 18923393

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables riboflavin kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in FMN biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in riboflavin biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
riboflavin kinase/FAD synthetase
XP_002292801.1
  • Riboflavin kinase, riboflavin metabolism, Vitamin B12 bioynthesis, FAD synthetase domain

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_012073.1 Reference assembly

    Range
    308937..309607 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002292765.1 → XP_002292801.1  riboflavin kinase/FAD synthetase [Thalassiosira pseudonana CCMP1335]

    See identical proteins and their annotated locations for XP_002292801.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    B8C967
    Conserved Domains (1) summary
    pfam01687
    Location:6 → 149
    Flavokinase; Riboflavin kinase
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases
Research Materials