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THAPSDRAFT_8416 sodium symporter [ Thalassiosira pseudonana CCMP1335 ]

Gene ID: 7446843, updated on 21-Dec-2023

Summary

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Gene symbol
THAPSDRAFT_8416
Gene description
sodium symporter
Locus tag
THAPSDRAFT_8416
Gene type
protein coding
RNA name
sodium symporter
RefSeq status
PROVISIONAL
Organism
Thalassiosira pseudonana CCMP1335 (strain: CCMP1335)
Lineage
Eukaryota; Stramenopiles; Bacillariophyta; Coscinodiscophyceae; Thalassiosirophycidae; Thalassiosirales; Thalassiosiraceae; Thalassiosira
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Genomic context

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Location:
chromosome: 10
Exon count:
1
Sequence:
Chromosome: 10; NC_012073.1 (535539..536477)

Chromosome 10 - NC_012073.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_012073.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The genome of the diatom Thalassiosira pseudonana: ecology, evolution, and metabolism. Armbrust EV, et al. Science, 2004 Oct 1. PMID 15459382
  2. The Phaeodactylum genome reveals the evolutionary history of diatom genomes. Bowler C, et al. Nature, 2008 Nov 13. PMID 18923393

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
sodium symporter
XP_002292648.1
  • based on sequence similarity and presence of sodium bile acid symporter domain

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_012073.1 Reference assembly

    Range
    535539..536477
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002292612.1 → XP_002292648.1  sodium symporter [Thalassiosira pseudonana CCMP1335]

    See identical proteins and their annotated locations for XP_002292648.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    B8C9F2
    Conserved Domains (1) summary
    COG0385
    Location:7 → 303
    YfeH; Predicted Na+-dependent transporter [General function prediction only]
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases
Research Materials