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THAPS_263067 protein kinase MAPKKKK, MAP4K-like protein [ Thalassiosira pseudonana CCMP1335 ]

Gene ID: 7446617, updated on 21-Dec-2023

Summary

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Gene symbol
THAPS_263067
Gene description
protein kinase MAPKKKK, MAP4K-like protein
Locus tag
THAPS_263067
Gene type
protein coding
RNA name
protein kinase MAPKKKK, MAP4K-like protein
RefSeq status
PROVISIONAL
Organism
Thalassiosira pseudonana CCMP1335 (strain: CCMP1335)
Lineage
Eukaryota; Stramenopiles; Bacillariophyta; Coscinodiscophyceae; Thalassiosirophycidae; Thalassiosirales; Thalassiosiraceae; Thalassiosira
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Genomic context

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See THAPS_263067 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
3
Sequence:
Chromosome: 7; NC_012070.1 (238053..239196, complement)

Chromosome 7 - NC_012070.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_012070.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The genome of the diatom Thalassiosira pseudonana: ecology, evolution, and metabolism. Armbrust EV, et al. Science, 2004 Oct 1. PMID 15459382
  2. The Phaeodactylum genome reveals the evolutionary history of diatom genomes. Bowler C, et al. Nature, 2008 Nov 13. PMID 18923393

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein serine/threonine kinase activator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
protein kinase MAPKKKK, MAP4K-like protein
XP_002296038.1
  • Contains conserved signature sequence of MAPKKKK, TFVGTPCWMAPEV, with the exception of an inserted C. May be involved in oxidative stress response. Supporting P. tricornutum EST support

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_012070.1 Reference assembly

    Range
    238053..239196 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002296002.1 → XP_002296038.1  protein kinase MAPKKKK, MAP4K-like protein, partial [Thalassiosira pseudonana CCMP1335]

    See identical proteins and their annotated locations for XP_002296038.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    B5YP84
    Conserved Domains (2) summary
    smart00220
    Location:1 → 235
    S_TKc; Serine/Threonine protein kinases, catalytic domain
    cl21453
    Location:1 → 238
    PKc_like; Protein Kinases, catalytic domain
Nucleotide Protein
Heading Accession and Version

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