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THAPSDRAFT_261272 hypothetical protein [ Thalassiosira pseudonana CCMP1335 ]

Gene ID: 7446475, updated on 18-Jun-2017

Summary

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Gene symbol
THAPSDRAFT_261272
Gene description
hypothetical protein
Locus tag
THAPSDRAFT_261272
Gene type
protein coding
RNA name
hypothetical protein
RefSeq status
PROVISIONAL
Organism
Thalassiosira pseudonana CCMP1335 (strain: CCMP1335)
Lineage
Eukaryota; Stramenopiles; Bacillariophyta; Coscinodiscophyceae; Thalassiosirophycidae; Thalassiosirales; Thalassiosiraceae; Thalassiosira
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Genomic context

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See THAPSDRAFT_261272 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
2
Sequence:
Chromosome: 2; NC_012065.1 (533894..534404, complement)

Chromosome 2 - NC_012065.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene phosphoribosyl pyrophosphate synthetase Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_012065.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The genome of the diatom Thalassiosira pseudonana: ecology, evolution, and metabolism. Armbrust EV, et al. Science, 2004 Oct 1. PMID 15459382
  2. The Phaeodactylum genome reveals the evolutionary history of diatom genomes. Bowler C, et al. Nature, 2008 Nov 13. PMID 18923393

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Names
hypothetical protein
XP_002287709.1
  • putative protein of unknown function with 2 CBS domains that are found in IMP dehydrogenases; putative protein of unknown function with CBS domains

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_012065.1 Reference assembly

    Range
    533894..534404 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002287673.1 → XP_002287709.1  hypothetical protein THAPSDRAFT_261272 [Thalassiosira pseudonana CCMP1335]

    See identical proteins and their annotated locations for XP_002287709.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    B8BTT4
    Conserved Domains (2) summary
    COG0517
    Location:3 → 119
    CBS; CBS domain [Signal transduction mechanisms]
    cl15354
    Location:11 → 121
    CBS_pair; The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins. CBS domains usually occur in tandem repeats. They associate to form a so-called ...
Nucleotide Protein
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