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THAPSDRAFT_262924 hypothetical protein [ Thalassiosira pseudonana CCMP1335 ]

Gene ID: 7446160, updated on 21-Dec-2023

Summary

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Gene symbol
THAPSDRAFT_262924
Gene description
hypothetical protein
Locus tag
THAPSDRAFT_262924
Gene type
protein coding
RNA name
hypothetical protein
RefSeq status
PROVISIONAL
Organism
Thalassiosira pseudonana CCMP1335 (strain: CCMP1335)
Lineage
Eukaryota; Stramenopiles; Bacillariophyta; Coscinodiscophyceae; Thalassiosirophycidae; Thalassiosirales; Thalassiosiraceae; Thalassiosira
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Genomic context

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Location:
chromosome: 6
Exon count:
1
Sequence:
Chromosome: 6; NC_012069.1 (1254752..1255051)

Chromosome 6 - NC_012069.1Genomic Context describing neighboring genes Neighboring gene t-complex protein 1 Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_012069.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The genome of the diatom Thalassiosira pseudonana: ecology, evolution, and metabolism. Armbrust EV, et al. Science, 2004 Oct 1. PMID 15459382
  2. The Phaeodactylum genome reveals the evolutionary history of diatom genomes. Bowler C, et al. Nature, 2008 Nov 13. PMID 18923393

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein serine/threonine phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein dephosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
hypothetical protein
XP_002291130.1
  • contains conserved protein phosphatase 2C domain (IPR001932); serine/threonine specific protein phosphatases; Its exact physiological role is still unclear; may be serine threonine specific; putative protein phosphatase type 2C (PP2C)

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_012069.1 Reference assembly

    Range
    1254752..1255051
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002291094.1 → XP_002291130.1  hypothetical protein THAPSDRAFT_262924, partial [Thalassiosira pseudonana CCMP1335]

    See identical proteins and their annotated locations for XP_002291130.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    B8C657
    Conserved Domains (1) summary
    smart00332
    Location:10 → 100
    PP2Cc; Serine/threonine phosphatases, family 2C, catalytic domain
Nucleotide Protein
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