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THAPSDRAFT_262849 chromate transporter [ Thalassiosira pseudonana CCMP1335 ]

Gene ID: 7445935, updated on 21-Dec-2023

Summary

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Gene symbol
THAPSDRAFT_262849
Gene description
chromate transporter
Locus tag
THAPSDRAFT_262849
Gene type
protein coding
RNA name
chromate transporter
RefSeq status
PROVISIONAL
Organism
Thalassiosira pseudonana CCMP1335 (strain: CCMP1335)
Lineage
Eukaryota; Stramenopiles; Bacillariophyta; Coscinodiscophyceae; Thalassiosirophycidae; Thalassiosirales; Thalassiosiraceae; Thalassiosira
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Genomic context

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See THAPSDRAFT_262849 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
2
Sequence:
Chromosome: 6; NC_012069.1 (900650..901724)

Chromosome 6 - NC_012069.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_012069.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The genome of the diatom Thalassiosira pseudonana: ecology, evolution, and metabolism. Armbrust EV, et al. Science, 2004 Oct 1. PMID 15459382
  2. The Phaeodactylum genome reveals the evolutionary history of diatom genomes. Bowler C, et al. Nature, 2008 Nov 13. PMID 18923393

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables chromate transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chromate transport IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
chromate transporter
XP_002291068.1
  • based on sequence similarity, presence of chromate transporter domain, and EST support

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_012069.1 Reference assembly

    Range
    900650..901724
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002291032.1 → XP_002291068.1  chromate transporter, partial [Thalassiosira pseudonana CCMP1335]

    See identical proteins and their annotated locations for XP_002291068.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    B8C5S5
    Conserved Domains (1) summary
    pfam02417
    Location:221 → 333
    Chromate_transp; Chromate transporter
Nucleotide Protein
Heading Accession and Version

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