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THAPSDRAFT_269513 hypothetical protein [ Thalassiosira pseudonana CCMP1335 ]

Gene ID: 7445912, updated on 18-Sep-2024

Summary

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Gene symbol
THAPSDRAFT_269513
Gene description
hypothetical protein
Locus tag
THAPSDRAFT_269513
Gene type
protein coding
RNA name
hypothetical protein
RefSeq status
PROVISIONAL
Organism
Thalassiosira pseudonana CCMP1335 (strain: CCMP1335)
Lineage
Eukaryota; Stramenopiles; Bacillariophyta; Coscinodiscophyceae; Thalassiosirophycidae; Thalassiosirales; Thalassiosiraceae; Thalassiosira
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Genomic context

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See THAPSDRAFT_269513 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
7
Sequence:
Chromosome: 10; NC_012073.1 (623902..625736)

Chromosome 10 - NC_012073.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_012073.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The genome of the diatom Thalassiosira pseudonana: ecology, evolution, and metabolism. Armbrust EV, et al. Science, 2004 Oct 1. PMID 15459382
  2. The Phaeodactylum genome reveals the evolutionary history of diatom genomes. Bowler C, et al. Nature, 2008 Nov 13. PMID 18923393

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 3-methylbutanoyl-CoA dehydrogenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables flavin adenine dinucleotide binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in L-leucine catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
hypothetical protein
XP_002292671.1
  • Partial support by cDNA; unknown protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_012073.1 Reference assembly

    Range
    623902..625736
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002292635.1 → XP_002292671.1  hypothetical protein THAPSDRAFT_269513 [Thalassiosira pseudonana CCMP1335]

    See identical proteins and their annotated locations for XP_002292671.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    B8C9I8
    Conserved Domains (2) summary
    PTZ00461
    Location:23 → 438
    PTZ00461; isovaleryl-CoA dehydrogenase; Provisional
    cl09933
    Location:57 → 438
    ACAD; Acyl-CoA dehydrogenase
Nucleotide Protein
Heading Accession and Version

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