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THAPSDRAFT_711 sodium dependent bile acid symporter [ Thalassiosira pseudonana CCMP1335 ]

Gene ID: 7445850, updated on 21-Dec-2023

Summary

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Gene symbol
THAPSDRAFT_711
Gene description
sodium dependent bile acid symporter
Locus tag
THAPSDRAFT_711
Gene type
protein coding
RNA name
sodium dependent bile acid symporter
RefSeq status
PROVISIONAL
Organism
Thalassiosira pseudonana CCMP1335 (strain: CCMP1335)
Lineage
Eukaryota; Stramenopiles; Bacillariophyta; Coscinodiscophyceae; Thalassiosirophycidae; Thalassiosirales; Thalassiosiraceae; Thalassiosira
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Genomic context

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See THAPSDRAFT_711 in Genome Data Viewer
Location:
chromosome: 12
Exon count:
3
Sequence:
Chromosome: 12; NC_012075.1 (636660..637684, complement)

Chromosome 12 - NC_012075.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene pseudo Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_012075.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The genome of the diatom Thalassiosira pseudonana: ecology, evolution, and metabolism. Armbrust EV, et al. Science, 2004 Oct 1. PMID 15459382
  2. The Phaeodactylum genome reveals the evolutionary history of diatom genomes. Bowler C, et al. Nature, 2008 Nov 13. PMID 18923393

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
sodium dependent bile acid symporter

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_012075.1 Reference assembly

    Range
    636660..637684 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002293182.1 → XP_002293218.1  sodium dependent bile acid symporter [Thalassiosira pseudonana CCMP1335]

    See identical proteins and their annotated locations for XP_002293218.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    B8CAH3
    Conserved Domains (1) summary
    COG0385
    Location:1 → 258
    YfeH; Predicted Na+-dependent transporter [General function prediction only]
Nucleotide Protein
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Gene LinkOut

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Molecular Biology Databases
Research Materials