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THAPSDRAFT_260991 DnaJ chaperone [ Thalassiosira pseudonana CCMP1335 ]

Gene ID: 7445158, updated on 21-Dec-2023

Summary

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Gene symbol
THAPSDRAFT_260991
Gene description
DnaJ chaperone
Locus tag
THAPSDRAFT_260991
Gene type
protein coding
RNA name
DnaJ chaperone
RefSeq status
PROVISIONAL
Organism
Thalassiosira pseudonana CCMP1335 (strain: CCMP1335)
Lineage
Eukaryota; Stramenopiles; Bacillariophyta; Coscinodiscophyceae; Thalassiosirophycidae; Thalassiosirales; Thalassiosiraceae; Thalassiosira
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Genomic context

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See THAPSDRAFT_260991 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
2
Sequence:
Chromosome: 1; NC_012064.1 (1718699..1719777)

Chromosome 1 - NC_012064.1Genomic Context describing neighboring genes Neighboring gene ATP dependent RNA helicase Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene nifU like protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_012064.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The genome of the diatom Thalassiosira pseudonana: ecology, evolution, and metabolism. Armbrust EV, et al. Science, 2004 Oct 1. PMID 15459382
  2. The Phaeodactylum genome reveals the evolutionary history of diatom genomes. Bowler C, et al. Nature, 2008 Nov 13. PMID 18923393

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables unfolded protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein folding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
DnaJ chaperone

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_012064.1 Reference assembly

    Range
    1718699..1719777
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002286234.1 → XP_002286270.1  DnaJ chaperone, partial [Thalassiosira pseudonana CCMP1335]

    See identical proteins and their annotated locations for XP_002286270.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    B8BR60
    Conserved Domains (3) summary
    cd10747
    Location:142 → 306
    DnaJ_C; C-terminal substrate binding domain of DnaJ and HSP40
    TIGR02349
    Location:3 → 318
    DnaJ_bact; chaperone protein DnaJ
    pfam00226
    Location:3 → 66
    DnaJ; DnaJ domain
Nucleotide Protein
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