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THAPSDRAFT_263766 transporter [ Thalassiosira pseudonana CCMP1335 ]

Gene ID: 7444541, updated on 21-Dec-2023

Summary

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Gene symbol
THAPSDRAFT_263766
Gene description
transporter
Locus tag
THAPSDRAFT_263766
Gene type
protein coding
RNA name
transporter
RefSeq status
PROVISIONAL
Organism
Thalassiosira pseudonana CCMP1335 (strain: CCMP1335)
Lineage
Eukaryota; Stramenopiles; Bacillariophyta; Coscinodiscophyceae; Thalassiosirophycidae; Thalassiosirales; Thalassiosiraceae; Thalassiosira
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Genomic context

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See THAPSDRAFT_263766 in Genome Data Viewer
Location:
chromosome: 11, map: unlocalized
Exon count:
2

NW_002243504.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_002243504.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The genome of the diatom Thalassiosira pseudonana: ecology, evolution, and metabolism. Armbrust EV, et al. Science, 2004 Oct 1. PMID 15459382
  2. The Phaeodactylum genome reveals the evolutionary history of diatom genomes. Bowler C, et al. Nature, 2008 Nov 13. PMID 18923393

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
transporter
XP_002296529.1
  • contains a sodium bile acid transporter; supported by a Phaeodactylum EST

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_002243504.1 Reference assembly

    Range
    200340..201064 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002296493.2 → XP_002296529.1  transporter [Thalassiosira pseudonana CCMP1335]

    See identical proteins and their annotated locations for XP_002296529.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    B8LBQ7
    Conserved Domains (1) summary
    cl19217
    Location:10 → 156
    SBF; Sodium Bile acid symporter family
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Research Materials