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THAPSDRAFT_263817 hypothetical protein [ Thalassiosira pseudonana CCMP1335 ]

Gene ID: 7444485, updated on 21-Dec-2023

Summary

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Gene symbol
THAPSDRAFT_263817
Gene description
hypothetical protein
Locus tag
THAPSDRAFT_263817
Gene type
protein coding
RNA name
hypothetical protein
RefSeq status
PROVISIONAL
Organism
Thalassiosira pseudonana CCMP1335 (strain: CCMP1335)
Lineage
Eukaryota; Stramenopiles; Bacillariophyta; Coscinodiscophyceae; Thalassiosirophycidae; Thalassiosirales; Thalassiosiraceae; Thalassiosira
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Genomic context

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See THAPSDRAFT_263817 in Genome Data Viewer
Location:
chromosome: 11, map: unlocalized
Exon count:
3

NW_002243504.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene chromodomain-helicase Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_002243504.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The genome of the diatom Thalassiosira pseudonana: ecology, evolution, and metabolism. Armbrust EV, et al. Science, 2004 Oct 1. PMID 15459382
  2. The Phaeodactylum genome reveals the evolutionary history of diatom genomes. Bowler C, et al. Nature, 2008 Nov 13. PMID 18923393

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
hypothetical protein
XP_002296472.1
  • based on presence of bromodomains a limited sequence similarity to other proteins.; putative protein containing DNA-binding with bromodomains

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_002243504.1 Reference assembly

    Range
    667510..668206
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002296436.1 → XP_002296472.1  hypothetical protein THAPSDRAFT_263817, partial [Thalassiosira pseudonana CCMP1335]

    See identical proteins and their annotated locations for XP_002296472.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    B8LC71
    Conserved Domains (1) summary
    cd04369
    Location:90 → 176
    Bromodomain; Bromodomain. Bromodomains are found in many chromatin-associated proteins and in nuclear histone acetyltransferases. They interact specifically with acetylated lysine.
Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases
Research Materials