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THAPSDRAFT_37948 hypothetical protein [ Thalassiosira pseudonana CCMP1335 ]

Gene ID: 7444224, updated on 18-Jun-2017

Summary

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Gene symbol
THAPSDRAFT_37948
Gene description
hypothetical protein
Locus tag
THAPSDRAFT_37948
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Thalassiosira pseudonana CCMP1335 (strain: CCMP1335)
Lineage
Eukaryota; Stramenopiles; Bacillariophyta; Coscinodiscophyceae; Thalassiosirophycidae; Thalassiosirales; Thalassiosiraceae; Thalassiosira
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Genomic context

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See THAPSDRAFT_37948 in Genome Data Viewer
Location:
chromosome: 17
Exon count:
5
Sequence:
Chromosome: 17; NC_012080.1 (385298..386172, complement)

Chromosome 17 - NC_012080.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene 26S proteasome regulatory subunit 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_012080.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The genome of the diatom Thalassiosira pseudonana: ecology, evolution, and metabolism. Armbrust EV, et al. Science, 2004 Oct 1. PMID 15459382
  2. The Phaeodactylum genome reveals the evolutionary history of diatom genomes. Bowler C, et al. Nature, 2008 Nov 13. PMID 18923393

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Names
hypothetical protein
XP_002294495.1
  • Contains homology to hypothetical proteins from a variety of organisms

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_012080.1 Reference assembly

    Range
    385298..386172 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002294459.1 → XP_002294495.1   THAPSDRAFT_37948 [Thalassiosira pseudonana CCMP1335]

    See identical proteins and their annotated locations for XP_002294495.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    B8CE73
    Conserved Domains (1) summary
    pfam01894
    Location:31 → 158
    UPF0047; uncharacterized protein family UPF0047
Nucleotide Protein
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