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THAPSDRAFT_25753 hypothetical protein [ Thalassiosira pseudonana CCMP1335 ]

Gene ID: 7443910, updated on 21-Dec-2023

Summary

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Gene symbol
THAPSDRAFT_25753
Gene description
hypothetical protein
Locus tag
THAPSDRAFT_25753
Gene type
protein coding
RNA name
hypothetical protein
RefSeq status
PROVISIONAL
Organism
Thalassiosira pseudonana CCMP1335 (strain: CCMP1335)
Lineage
Eukaryota; Stramenopiles; Bacillariophyta; Coscinodiscophyceae; Thalassiosirophycidae; Thalassiosirales; Thalassiosiraceae; Thalassiosira
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Genomic context

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See THAPSDRAFT_25753 in Genome Data Viewer
Location:
chromosome: 22
Exon count:
3
Sequence:
Chromosome: 22; NC_012085.1 (612116..614312)

Chromosome 22 - NC_012085.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_012085.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The genome of the diatom Thalassiosira pseudonana: ecology, evolution, and metabolism. Armbrust EV, et al. Science, 2004 Oct 1. PMID 15459382
  2. The Phaeodactylum genome reveals the evolutionary history of diatom genomes. Bowler C, et al. Nature, 2008 Nov 13. PMID 18923393

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphomannomutase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
hypothetical protein
XP_002294894.1
  • Function unknown.; hypothetical protein with weak similarity to phosphoglucomutase

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_012085.1 Reference assembly

    Range
    612116..614312
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002294858.1 → XP_002294894.1  hypothetical protein THAPSDRAFT_25753 [Thalassiosira pseudonana CCMP1335]

    See identical proteins and their annotated locations for XP_002294894.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    B8CFR2
    Conserved Domains (2) summary
    PLN02371
    Location:2 → 640
    PLN02371; phosphoglucosamine mutase family protein
    cl03757
    Location:132 → 609
    phosphohexomutase; The alpha-D-phosphohexomutase superfamily includes several related enzymes that catalyze a reversible intramolecular phosphoryl transfer on their sugar substrates. Members of this family include the phosphoglucomutases (PGM1 and PGM2), phosphoglucosamine ...
Nucleotide Protein
Heading Accession and Version

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