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RS3A RS3A, ribosomal protein 3A 40S small ribosomal subunit [ Thalassiosira pseudonana CCMP1335 ]

Gene ID: 7443365, updated on 21-Dec-2023

Summary

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Gene symbol
RS3A
Gene description
RS3A, ribosomal protein 3A 40S small ribosomal subunit
Locus tag
THAPSDRAFT_26046
Gene type
protein coding
RNA name
RS3A, ribosomal protein 3A 40S small ribosomal subunit
RefSeq status
PROVISIONAL
Organism
Thalassiosira pseudonana CCMP1335 (strain: CCMP1335)
Lineage
Eukaryota; Stramenopiles; Bacillariophyta; Coscinodiscophyceae; Thalassiosirophycidae; Thalassiosirales; Thalassiosiraceae; Thalassiosira
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Genomic context

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See RS3A in Genome Data Viewer
Location:
chromosome: 20
Exon count:
2
Sequence:
Chromosome: 20; NC_012083.1 (375554..377084)

Chromosome 20 - NC_012083.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene rcc1-repeat-containing protein Neighboring gene U2 SnRNP auxillary factor, splicing factor Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_012083.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The genome of the diatom Thalassiosira pseudonana: ecology, evolution, and metabolism. Armbrust EV, et al. Science, 2004 Oct 1. PMID 15459382
  2. The Phaeodactylum genome reveals the evolutionary history of diatom genomes. Bowler C, et al. Nature, 2008 Nov 13. PMID 18923393

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables structural constituent of ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in translation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
RS3A, ribosomal protein 3A 40S small ribosomal subunit
XP_002294599.1
  • RS3A, ribosomal protein 3A, 40S small ribosomal subunit, nuclear, translation, protein biosynthesis

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_012083.1 Reference assembly

    Range
    375554..377084
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002294563.1 → XP_002294599.1  RS3A, ribosomal protein 3A 40S small ribosomal subunit [Thalassiosira pseudonana CCMP1335]

    See identical proteins and their annotated locations for XP_002294599.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    B8CET5
    Conserved Domains (1) summary
    pfam01015
    Location:20 → 221
    Ribosomal_S3Ae; Ribosomal S3Ae family
Nucleotide Protein
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